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O. cuniculus Gene: CHD9 - ENSOCUG00000001016 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000001016
NameCHD9
Descriptionchromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)bc022889, flj12178, kiaa0308
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.09e3
  • 6.09e3
  • 6.99e3
70.39
  • 70.39
  • 65.97
AEIR
  • AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
6.16e3
  • 6.16e3
70.01
  • 70.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.23e3
  • 6.23e3
  • 6.36e3
  • 9.98e3
69.70
  • 69.70
  • 69.06
  • 51.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
6.38e3
  • 6.38e3
68.96
  • 68.96
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
6.87e3
  • 6.87e3
66.55
  • 66.55
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.03e3
  • 7.03e3
65.80
  • 65.80
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.66e3
  • 7.66e3
62.71
  • 62.71
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
7.77e3
  • 7.77e3
62.20
  • 62.20
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
8.10e3
  • 8.10e3
60.57
  • 60.57
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.12e3
  • 8.12e3
60.47
  • 60.47
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
8.13e3
  • 8.13e3
60.45
  • 60.45
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.41e3
  • 8.41e3
  • 1.01e4
59.09
  • 59.09
  • 50.62
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.71e3
  • 8.71e3
57.59
  • 57.59
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.97e3
  • 8.97e3
56.36
  • 56.36
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
9.65e3
  • 9.65e3
53.04
  • 53.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.80e3
  • 9.80e3
  • 1.30e4
52.30
  • 52.30
  • 36.50
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
46.09
  • 46.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Mammalia11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000001016.

Cross-references

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