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O. cuniculus Gene: SDK1 - ENSOCUG00000001239 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000001239
NameSDK1
Descriptionsidekick cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:19307]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)flj31425
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
4.58e3
  • 4.58e3
77.73
  • 77.73
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
6.97e3
  • 6.97e3
66.06
  • 66.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.05e3
  • 7.05e3
  • 8.55e3
65.68
  • 65.68
  • 58.40
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.47e3
  • 7.47e3
63.64
  • 63.64
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.76e3
  • 7.76e3
  • 8.94e3
  • 1.03e4
62.23
  • 62.23
  • 56.51
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
8.23e3
  • 8.23e3
59.96
  • 59.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.23e3
  • 8.23e3
59.95
  • 59.95
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
9.00e3
  • 9.00e3
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
9.62e3
  • 9.62e3
53.19
  • 53.19
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
9.85e3
  • 9.85e3
52.06
  • 52.06
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.07e4
  • 1.07e4
48.14
  • 48.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
  • 1.33e4
43.63
  • 43.63
  • 35.09
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
41.50
  • 41.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.22e4
40.94
  • 40.94
  • 40.62
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
40.35
  • 40.35
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
37.54
  • 37.54
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
35.88
  • 35.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euarchontoglires1 species1 geneCompare expression

Orthology information comes from OMA : ENSOCUG00000001239.

Cross-references

EnsemblENSOCUG00000001239 (SDK1)
HGNCHGNC:19307 (SDK1)
Uniprot/SPTREMBLG1SF16, G1SF16_RABIT

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