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O. cuniculus Gene: VAMP7 - ENSOCUG00000001270 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000001270
NameVAMP7
Descriptionvesicle associated membrane protein 7 [Source:HGNC Symbol;Acc:HGNC:11486]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)sybl1, ti-vamp, vamp-7
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
2.34e3
  • 2.34e3
88.62
  • 88.62
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.88e3
  • 2.88e3
86.00
  • 86.00
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
3.26e3
  • 3.26e3
84.16
  • 84.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.32e3
  • 3.32e3
  • 5.76e3
83.83
  • 83.83
  • 71.97
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.73e3
  • 3.73e3
81.85
  • 81.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.77e3
  • 3.77e3
  • 6.19e3
81.67
  • 81.67
  • 69.85
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
4.34e3
  • 4.34e3
  • 4.48e3
  • 8.44e3
78.86
  • 78.86
  • 78.21
  • 58.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.47e3
  • 4.47e3
78.24
  • 78.24
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
5.29e3
  • 5.29e3
74.24
  • 74.24
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
5.44e3
  • 5.44e3
73.52
  • 73.52
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
6.11e3
  • 6.11e3
70.28
  • 70.28
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
6.24e3
  • 6.24e3
69.65
  • 69.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.39e3
  • 6.39e3
68.91
  • 68.91
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.27e3
  • 7.27e3
  • 1.24e4
64.64
  • 64.64
  • 39.47
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
7.49e3
  • 7.49e3
63.56
  • 63.56
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.76e3
  • 7.76e3
62.25
  • 62.25
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
7.76e3
  • 7.76e3
62.23
  • 62.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Theria12 species13 genesCompare expression
Mammalia13 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000001270.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSOCUG00000001270.

Cross-references

EnsemblENSOCUG00000001270 (VAMP7)
HGNCHGNC:11486 (VAMP7)
Uniprot/SPTREMBLG1SF35, G1SF35_RABIT

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