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O. cuniculus Gene: SLITRK2 - ENSOCUG00000002285 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000002285
NameSLITRK2
DescriptionSLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)cxorf2, kiaa1854, slitl1
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
6.48e3
  • 6.48e3
68.44
  • 68.44
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.93e3
  • 7.93e3
61.42
  • 61.42
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.93e3
  • 8.93e3
56.54
  • 56.54
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.36e4
41.84
  • 41.84
  • 34.00
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
37.73
  • 37.73
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.33e4
  • 1.33e4
35.30
  • 35.30
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
34.73
  • 34.73
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.45e4
  • 1.45e4
29.32
  • 29.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
  • 1.51e4
  • 1.67e4
28.99
  • 28.99
  • 26.49
  • 18.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
27.27
  • 27.27
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
25.36
  • 25.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000002285.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSOCUG00000002285.

Cross-references

EnsemblENSOCUG00000002285 (SLITRK2)
HGNCHGNC:13449 (SLITRK2)
Uniprot/SPTREMBLG1SH75, G1SH75_RABIT

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