O. cuniculus Gene: HP1BP3 - ENSOCUG00000002445 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000002445
NameHP1BP3
Descriptionheterochromatin protein 1, binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24973]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)hp1-bp74
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
746
  • 746
96.37
  • 96.37
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
779
  • 779
96.21
  • 96.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
810
  • 810
  • 971
  • 1.87e3
96.06
  • 96.06
  • 95.28
  • 90.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
812
  • 812
96.05
  • 96.05
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
826
  • 826
95.98
  • 95.98
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
879
  • 879
95.73
  • 95.73
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.07e3
  • 1.07e3
94.80
  • 94.80
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.23e3
  • 1.23e3
94.02
  • 94.02
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.35e3
  • 1.35e3
93.44
  • 93.44
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.68e3
  • 1.68e3
91.84
  • 91.84
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.71e3
  • 1.71e3
  • 2.48e3
91.70
  • 91.70
  • 87.94
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
  • 2.77e3
90.05
  • 90.05
  • 86.53
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.30e3
  • 2.30e3
88.82
  • 88.82
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
2.31e3
  • 2.31e3
88.74
  • 88.74
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.45e3
  • 2.45e3
  • 3.34e3
88.10
  • 88.10
  • 83.73
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.68e3
  • 2.68e3
86.96
  • 86.96
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.75e3
  • 2.75e3
86.64
  • 86.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species4 genesCompare expression
Euarchontoglires6 species7 genesCompare expression
Boreoeutheria12 species13 genesCompare expression
Theria13 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000002445.

Cross-references

EnsemblENSOCUG00000002445 (HP1BP3)
HGNCHGNC:24973 (HP1BP3)
EMBLAAGW02059931, AAGW02059932
Uniprot/SPTREMBLG1SHK6, G1SHK6_RABIT

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