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O. cuniculus Gene: RBM42 - ENSOCUG00000003337 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000003337
NameRBM42
DescriptionRNA binding motif protein 42 [Source:HGNC Symbol;Acc:HGNC:28117]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)mgc10433
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.31e3
  • 4.31e3
79.05
  • 79.05
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.31e3
  • 4.31e3
  • 6.17e3
79.03
  • 79.03
  • 69.98
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.16e3
  • 5.16e3
74.90
  • 74.90
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
5.22e3
  • 5.22e3
74.60
  • 74.60
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.39e3
  • 5.39e3
73.77
  • 73.77
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
5.66e3
  • 5.66e3
72.48
  • 72.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.66e3
  • 5.66e3
  • 6.98e3
72.46
  • 72.46
  • 66.05
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
5.70e3
  • 5.70e3
72.26
  • 72.26
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
5.82e3
  • 5.82e3
71.68
  • 71.68
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
5.85e3
  • 5.85e3
71.53
  • 71.53
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.94e3
  • 5.94e3
71.08
  • 71.08
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.03e3
  • 6.03e3
70.65
  • 70.65
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
6.04e3
  • 6.04e3
70.59
  • 70.59
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
6.05e3
  • 6.05e3
70.57
  • 70.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.33e3
  • 6.33e3
  • 8.68e3
  • 9.10e3
69.20
  • 69.20
  • 57.78
  • 55.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
6.41e3
  • 6.41e3
68.80
  • 68.80
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.79e3
  • 6.79e3
66.97
  • 66.97
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
6.89e3
  • 6.89e3
66.45
  • 66.45
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
6.92e3
  • 6.92e3
66.33
  • 66.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.33e3
  • 7.33e3
  • 8.25e3
64.31
  • 64.31
  • 59.84
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.48e3
  • 7.48e3
63.62
  • 63.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000003337.

Cross-references

EnsemblENSOCUG00000003337 (RBM42)
HGNCHGNC:28117 (RBM42)
Uniprot/SPTREMBLG1SJH8, G1SJH8_RABIT

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