We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

O. cuniculus Gene: SPATA21 - ENSOCUG00000003478 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000003478
NameSPATA21
Descriptionspermatogenesis associated 21 [Source:HGNC Symbol;Acc:HGNC:28026]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)spergen-2, spergen2
Orthologs(s)7 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
822
  • 822
  • 1.14e3
96.01
  • 96.01
  • 94.45
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.96e3
  • 5.96e3
  • 1.10e4
70.98
  • 70.98
  • 46.27
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.97e3
  • 5.97e3
70.96
  • 70.96
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.98e3
  • 5.98e3
70.90
  • 70.90
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.73e3
  • 6.73e3
67.27
  • 67.27
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.46e3
  • 7.46e3
63.70
  • 63.70
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
63.22
  • 63.22
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.80e3
  • 7.80e3
  • 1.37e4
  • 1.40e4
62.05
  • 62.05
  • 33.29
  • 31.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.09e3
  • 8.09e3
  • 1.05e4
60.63
  • 60.63
  • 48.92
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
8.72e3
  • 8.72e3
57.56
  • 57.56
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
50.91
  • 50.91
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
46.49
  • 46.49
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
43.62
  • 43.62
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.20e4
  • 1.20e4
41.77
  • 41.77
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
41.36
  • 41.36
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.21e4
  • 1.21e4
41.24
  • 41.24
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
39.80
  • 39.80
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
39.48
  • 39.48
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
39.31
  • 39.31
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
33.28
  • 33.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSOCUG00000003478 (SPATA21)
HGNCHGNC:28026 (SPATA21)
Uniprot/SPTREMBLG1SJT3, G1SJT3_RABIT

Do not show this banner again