O. cuniculus Gene: SLC39A8 - ENSOCUG00000004184 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000004184
NameSLC39A8
Descriptionsolute carrier family 39 (zinc transporter), member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)bigm103
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.50e3
  • 1.50e3
92.72
  • 92.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.13e3
  • 2.13e3
  • 3.47e3
89.66
  • 89.66
  • 83.13
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.33e3
  • 2.33e3
  • 4.61e3
  • 8.01e3
88.68
  • 88.68
  • 77.55
  • 61.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
2.60e3
  • 2.60e3
87.37
  • 87.37
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
3.51e3
  • 3.51e3
82.92
  • 82.92
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.98e3
  • 4.98e3
75.78
  • 75.78
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
5.25e3
  • 5.25e3
74.46
  • 74.46
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
5.57e3
  • 5.57e3
72.90
  • 72.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.57e3
  • 5.57e3
72.87
  • 72.87
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
9.03e3
  • 9.03e3
56.07
  • 56.07
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.57e3
  • 9.57e3
  • 9.96e3
53.41
  • 53.41
  • 51.51
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
9.77e3
  • 9.77e3
52.46
  • 52.46
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
  • 1.33e4
47.25
  • 47.25
  • 35.31
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
45.75
  • 45.75
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
45.74
  • 45.74
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
44.00
  • 44.00
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
42.96
  • 42.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000004184.

Cross-references

EnsemblENSOCUG00000004184 (SLC39A8)
HGNCHGNC:20862 (SLC39A8)
EMBLAAGW02022187
Uniprot/SPTREMBLG1SL93, G1SL93_RABIT

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