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O. cuniculus Gene: FAN1 - ENSOCUG00000004306 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000004306
NameFAN1
DescriptionFANCD2/FANCI-associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)kiaa1018, mtmr15
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.71e3
  • 4.71e3
77.07
  • 77.07
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.72e3
  • 4.72e3
77.03
  • 77.03
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.27e3
  • 5.27e3
74.36
  • 74.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.91e3
  • 5.91e3
  • 6.15e3
71.26
  • 71.26
  • 70.09
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.15e3
  • 6.15e3
  • 6.84e3
70.09
  • 70.09
  • 66.69
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.59e3
  • 6.59e3
67.91
  • 67.91
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
6.85e3
  • 6.85e3
66.65
  • 66.65
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
6.94e3
  • 6.94e3
66.25
  • 66.25
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
7.39e3
  • 7.39e3
64.04
  • 64.04
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
7.56e3
  • 7.56e3
63.22
  • 63.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.58e3
  • 7.58e3
  • 7.81e3
63.09
  • 63.09
  • 62.00
AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
7.61e3
  • 7.61e3
62.96
  • 62.96
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
7.92e3
  • 7.92e3
61.45
  • 61.45
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
7.94e3
  • 7.94e3
61.36
  • 61.36
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.00e3
  • 8.00e3
  • 8.03e3
  • 8.21e3
61.06
  • 61.06
  • 60.95
  • 60.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.04e3
  • 8.04e3
60.87
  • 60.87
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.40e3
  • 9.40e3
54.24
  • 54.24
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000004306.

Cross-references

EnsemblENSOCUG00000004306 (FAN1)
HGNCHGNC:29170 (FAN1)
EMBLAAGW02050446
Uniprot/SPTREMBLG1SLI5, G1SLI5_RABIT

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