O. cuniculus Gene: XCR1 - ENSOCUG00000004322 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000004322
NameXCR1
Descriptionchemokine (C motif) receptor 1 [Source:HGNC Symbol;Acc:HGNC:1625]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)ccxcr1, gpr5
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
8.84e3
  • 8.84e3
56.96
  • 56.96
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
  • 1.39e4
43.89
  • 43.89
  • 32.35
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
39.12
  • 39.12
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
38.62
  • 38.62
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
38.08
  • 38.08
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
  • 1.47e4
35.97
  • 35.97
  • 28.22
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.34e4
  • 1.50e4
35.01
  • 35.01
  • 34.87
  • 26.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.36e4
  • 1.36e4
33.82
  • 33.82
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
32.34
  • 32.34
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.40e4
  • 1.40e4
31.72
  • 31.72
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
27.79
  • 27.79
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
24.32
  • 24.32
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
18.53
  • 18.53
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.75e4
  • 1.75e4
14.61
  • 14.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000004322.

Cross-references

EnsemblENSOCUG00000004322 (XCR1)
HGNCHGNC:1625 (XCR1)
EMBLAAGW02044002
Uniprot/SPTREMBLG1SLJ1, G1SLJ1_RABIT

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