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O. cuniculus Gene: SLC17A2 - ENSOCUG00000004433 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000004433
NameSLC17A2
Descriptionsolute carrier family 17, member 2 [Source:HGNC Symbol;Acc:HGNC:10930]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)npt3
Orthologs(s)13 orthologs
Paralog(s)31 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
732
  • 732
  • 927
96.44
  • 96.44
  • 95.50
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.12e3
  • 9.12e3
55.64
  • 55.64
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.13e4
  • 1.13e4
44.77
  • 44.77
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
40.97
  • 40.97
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
39.51
  • 39.51
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
36.46
  • 36.46
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
36.44
  • 36.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
  • 1.62e4
22.65
  • 22.65
  • 21.20
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000004433.

Paralogs (same species)

Cross-references

EnsemblENSOCUG00000004433 (SLC17A2)
HGNCHGNC:10930 (SLC17A2)
EMBLAAGW02052080
Uniprot/SPTREMBLG1SLT3, G1SLT3_RABIT

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