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O. cuniculus Gene: LRRC59 - ENSOCUG00000004613 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000004613
NameLRRC59
Descriptionleucine rich repeat containing 59 [Source:HGNC Symbol;Acc:HGNC:28817]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)flj21675, pro1855
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
900
  • 900
  • 1.42e3
95.63
  • 95.63
  • 93.12
AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
989
  • 989
95.19
  • 95.19
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.35e3
  • 1.35e3
93.43
  • 93.43
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.35e3
  • 1.35e3
93.41
  • 93.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.45e3
  • 1.45e3
  • 4.25e3
92.96
  • 92.96
  • 79.31
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.49e3
  • 1.49e3
92.78
  • 92.78
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.70e3
  • 1.70e3
91.75
  • 91.75
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.82e3
  • 1.82e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
2.12e3
  • 2.12e3
89.69
  • 89.69
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
2.47e3
  • 2.47e3
87.98
  • 87.98
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.50e3
  • 2.50e3
87.83
  • 87.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.97e3
  • 2.97e3
  • 4.89e3
85.53
  • 85.53
  • 76.21
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.06e3
  • 3.06e3
  • 3.55e3
  • 3.63e3
85.11
  • 85.11
  • 82.74
  • 82.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
3.09e3
  • 3.09e3
84.94
  • 84.94
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.25e3
  • 3.25e3
84.19
  • 84.19
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.06e3
  • 4.06e3
80.27
  • 80.27
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
4.07e3
  • 4.07e3
80.20
  • 80.20
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.11e3
  • 4.11e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.12e3
  • 4.12e3
79.95
  • 79.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000004613.

Cross-references

EnsemblENSOCUG00000004613 (LRRC59)
HGNCHGNC:28817 (LRRC59)
EMBLAAGW02039542, AAGW02039543
Uniprot/SPTREMBLG1SM52, G1SM52_RABIT

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