O. cuniculus Gene: HOPX - ENSOCUG00000005107 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000005107
NameHOPX
DescriptionHOP homeobox [Source:HGNC Symbol;Acc:HGNC:24961]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)hop, lagy, necc1, ob1, smap31
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
80.5
  • 80.5
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
120
  • 120
99.42
  • 99.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
141
  • 141
  • 142
  • 209
99.32
  • 99.32
  • 99.31
  • 98.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
159
  • 159
99.23
  • 99.23
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
396
  • 396
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
986
  • 986
95.21
  • 95.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.16e3
  • 1.16e3
  • 5.52e3
94.35
  • 94.35
  • 73.13
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.81e3
  • 1.81e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.06e3
  • 2.06e3
89.99
  • 89.99
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.78e3
  • 2.78e3
86.46
  • 86.46
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.44e3
  • 3.44e3
83.25
  • 83.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.38e3
  • 4.38e3
  • 4.42e3
78.68
  • 78.68
  • 78.50
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.23e3
  • 5.23e3
74.57
  • 74.57
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.24e3
  • 5.24e3
74.50
  • 74.50
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
6.42e3
  • 6.42e3
68.77
  • 68.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.68e3
  • 6.68e3
67.48
  • 67.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.83e3
  • 8.83e3
  • 1.18e4
57.02
  • 57.02
  • 42.33
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
9.15e3
  • 9.15e3
55.45
  • 55.45
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.48e3
  • 9.48e3
53.89
  • 53.89
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
47.35
  • 47.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Mammalia11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000005107.

Cross-references

EnsemblENSOCUG00000005107 (HOPX)
HGNCHGNC:24961 (HOPX)
EMBLAAGW02023472
Uniprot/SPTREMBLG1SN79, G1SN79_RABIT

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