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O. cuniculus Gene: PHF19 - ENSOCUG00000005659 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000005659
NamePHF19
DescriptionPHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)dkfzp727g051, mtf2l1, pcl3, tdrd19b
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
7.10e3
  • 7.10e3
65.46
  • 65.46
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.43e3
  • 7.43e3
  • 8.51e3
63.82
  • 63.82
  • 58.57
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.82e3
  • 7.82e3
  • 9.46e3
  • 9.82e3
61.96
  • 61.96
  • 53.98
  • 52.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.63e3
  • 8.63e3
58.02
  • 58.02
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
9.31e3
  • 9.31e3
54.69
  • 54.69
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.33e3
  • 9.33e3
54.61
  • 54.61
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
9.35e3
  • 9.35e3
54.51
  • 54.51
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
9.61e3
  • 9.61e3
53.24
  • 53.24
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
9.71e3
  • 9.71e3
52.73
  • 52.73
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
9.81e3
  • 9.81e3
52.24
  • 52.24
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.85e3
  • 9.85e3
52.06
  • 52.06
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
9.86e3
  • 9.86e3
52.01
  • 52.01
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
47.76
  • 47.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.20e4
45.36
  • 45.36
  • 41.37
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
44.44
  • 44.44
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
42.69
  • 42.69
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
36.62
  • 36.62
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
28.81
  • 28.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000005659.

Cross-references

EnsemblENSOCUG00000005659 (PHF19)
HGNCHGNC:24566 (PHF19)
Uniprot/SPTREMBLG1SPE5, G1SPE5_RABIT

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