O. cuniculus Gene: DCHS1 - ENSOCUG00000006606 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000006606
NameDCHS1
Descriptiondachsous cadherin-related 1 [Source:HGNC Symbol;Acc:HGNC:13681]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)cdh25, cdhr6, fib1, flj11790, kiaa1773, pcdh16
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
3.70e3
  • 3.70e3
81.99
  • 81.99
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
4.50e3
  • 4.50e3
78.12
  • 78.12
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
5.55e3
  • 5.55e3
72.99
  • 72.99
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
6.08e3
  • 6.08e3
70.41
  • 70.41
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.31e3
  • 6.31e3
  • 8.96e3
69.29
  • 69.29
  • 56.41
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.48e3
  • 6.48e3
68.45
  • 68.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.57e3
  • 6.57e3
  • 7.18e3
68.01
  • 68.01
  • 65.04
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
8.55e3
  • 8.55e3
58.38
  • 58.38
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.56e3
  • 8.56e3
58.35
  • 58.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.48e3
  • 9.48e3
  • 1.09e4
  • 1.20e4
53.85
  • 53.85
  • 47.01
  • 41.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
49.78
  • 49.78
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
47.69
  • 47.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.13e4
45.73
  • 45.73
  • 45.14
AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.18e4
  • 1.18e4
42.79
  • 42.79
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
42.38
  • 42.38
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
41.24
  • 41.24
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
40.87
  • 40.87
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.23e4
  • 1.23e4
40.22
  • 40.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000006606.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSOCUG00000006606.

Cross-references

EnsemblENSOCUG00000006606 (DCHS1)
HGNCHGNC:13681 (DCHS1)
EMBLAAGW02008015
Uniprot/SPTREMBLG1SRC2, G1SRC2_RABIT

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