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O. cuniculus Gene: RAB4A - ENSOCUG00000006816 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000006816
NameRAB4A
DescriptionRAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)hres-1/rab4, rab4
Orthologs(s)22 orthologs
Paralog(s)63 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.96e3
  • 5.96e3
70.98
  • 70.98
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.98e3
  • 5.98e3
70.90
  • 70.90
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
6.28e3
  • 6.28e3
69.43
  • 69.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.38e3
  • 6.38e3
  • 1.10e4
68.94
  • 68.94
  • 46.67
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
67.53
  • 67.53
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
6.86e3
  • 6.86e3
66.62
  • 66.62
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
7.56e3
  • 7.56e3
63.18
  • 63.18
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
7.65e3
  • 7.65e3
62.78
  • 62.78
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.75e3
  • 7.75e3
62.26
  • 62.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.97e3
  • 7.97e3
  • 8.70e3
61.24
  • 61.24
  • 57.64
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
8.22e3
  • 8.22e3
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.42e3
  • 8.42e3
  • 8.75e3
  • 9.43e3
59.01
  • 59.01
  • 57.40
  • 54.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.44e3
  • 8.44e3
  • 8.61e3
58.94
  • 58.94
  • 58.11
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.57e3
  • 8.57e3
58.27
  • 58.27
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.85e3
  • 8.85e3
56.95
  • 56.95
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.91e3
  • 8.91e3
56.62
  • 56.62
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.95e3
  • 8.95e3
56.46
  • 56.46
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.11e3
  • 9.11e3
55.66
  • 55.66
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.02e4
  • 1.02e4
50.53
  • 50.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000006816.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Opisthokonta14 genesCompare expression
Eukaryota63 genesCompare expression

Paralogy information comes from OMA : ENSOCUG00000006816.

Cross-references

EnsemblENSOCUG00000006816 (RAB4A)
HGNCHGNC:9781 (RAB4A)
Uniprot/SPTREMBLG1SRS3, G1SRS3_RABIT

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