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O. cuniculus Gene: PGBD2 - ENSOCUG00000007522 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000007522
NamePGBD2
DescriptionpiggyBac transposable element derived 2 [Source:HGNC Symbol;Acc:HGNC:19399]
OrganismOryctolagus cuniculus (rabbit)
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.45e3
  • 6.45e3
  • 7.91e3
68.62
  • 68.62
  • 61.50
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
6.59e3
  • 6.59e3
67.93
  • 67.93
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.77e3
  • 6.77e3
67.06
  • 67.06
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.90e3
  • 7.90e3
  • 1.04e4
  • 1.14e4
61.54
  • 61.54
  • 49.62
  • 44.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
8.38e3
  • 8.38e3
59.22
  • 59.22
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
8.55e3
  • 8.55e3
58.39
  • 58.39
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.63e3
  • 8.63e3
58.02
  • 58.02
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.96e3
  • 8.96e3
56.41
  • 56.41
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
8.97e3
  • 8.97e3
56.34
  • 56.34
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
8.98e3
  • 8.98e3
56.28
  • 56.28
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.11e3
  • 9.11e3
  • 9.88e3
55.67
  • 55.67
  • 51.92
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
9.14e3
  • 9.14e3
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
9.22e3
  • 9.22e3
55.14
  • 55.14
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
9.25e3
  • 9.25e3
55.00
  • 55.00
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
9.32e3
  • 9.32e3
54.63
  • 54.63
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.36e3
  • 9.36e3
54.44
  • 54.44
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.69e3
  • 9.69e3
52.83
  • 52.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.84e3
  • 9.84e3
  • 9.94e3
52.11
  • 52.11
  • 51.62
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
47.87
  • 47.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSOCUG00000007522.

Cross-references

EnsemblENSOCUG00000007522 (PGBD2)
HGNCHGNC:19399 (PGBD2)
Uniprot/SPTREMBLG1U4J0, G1U4J0_RABIT

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