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O. cuniculus Gene: RCL1 - ENSOCUG00000008161 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000008161
NameRCL1
DescriptionRNA terminal phosphate cyclase-like 1 [Source:HGNC Symbol;Acc:HGNC:17687]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)rnac, rpcl1
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.06e3
  • 1.06e3
  • 1.28e3
94.85
  • 94.85
  • 93.76
AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
4.67e3
  • 4.67e3
77.29
  • 77.29
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.17e3
  • 5.17e3
74.86
  • 74.86
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.17e3
  • 5.17e3
74.84
  • 74.84
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.41e3
  • 5.41e3
73.66
  • 73.66
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.05e3
  • 6.05e3
  • 6.65e3
  • 6.73e3
70.56
  • 70.56
  • 67.66
  • 67.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
6.10e3
  • 6.10e3
70.32
  • 70.32
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
6.18e3
  • 6.18e3
69.90
  • 69.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.41e3
  • 6.41e3
68.81
  • 68.81
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
6.57e3
  • 6.57e3
68.03
  • 68.03
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.71e3
  • 6.71e3
  • 7.09e3
67.34
  • 67.34
  • 65.52
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.94e3
  • 6.94e3
66.23
  • 66.23
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.03e3
  • 7.03e3
  • 8.13e3
65.80
  • 65.80
  • 60.41
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
7.74e3
  • 7.74e3
62.34
  • 62.34
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.93e3
  • 7.93e3
61.41
  • 61.41
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
8.95e3
  • 8.95e3
56.45
  • 56.45
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.54e3
  • 9.54e3
53.57
  • 53.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000008161.

Cross-references

EnsemblENSOCUG00000008161 (RCL1)
HGNCHGNC:17687 (RCL1)
EMBLAAGW02032590, AAGW02032591
Uniprot/SPTREMBLG1SUL4, G1SUL4_RABIT

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