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O. cuniculus Gene: PSMD1 - ENSOCUG00000008565 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000008565
NamePSMD1
Descriptionproteasome 26S subunit, non-ATPase 1 [Source:HGNC Symbol;Acc:HGNC:9554]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)p112, rpn2, s1
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.26e3
  • 1.26e3
93.87
  • 93.87
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.26e3
  • 1.26e3
93.86
  • 93.86
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.35e3
  • 1.35e3
  • 1.96e3
  • 2.35e3
93.44
  • 93.44
  • 90.45
  • 88.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.44e3
  • 1.44e3
92.99
  • 92.99
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.61e3
  • 1.61e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.82e3
  • 1.82e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.83e3
  • 1.83e3
91.10
  • 91.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.95e3
  • 1.95e3
  • 2.09e3
90.53
  • 90.53
  • 89.81
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.98e3
  • 1.98e3
  • 2.22e3
90.35
  • 90.35
  • 89.21
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
90.01
  • 90.01
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
2.09e3
  • 2.09e3
89.84
  • 89.84
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.31e3
  • 2.31e3
88.79
  • 88.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.55e3
  • 2.55e3
  • 2.74e3
87.58
  • 87.58
  • 86.66
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
2.58e3
  • 2.58e3
87.44
  • 87.44
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.68e3
  • 2.68e3
86.96
  • 86.96
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
2.69e3
  • 2.69e3
86.93
  • 86.93
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
3.02e3
  • 3.02e3
85.32
  • 85.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000008565.

Cross-references

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