O. cuniculus Gene: PTCHD4 - ENSOCUG00000009411 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000009411
NamePTCHD4
Descriptionpatched domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21345]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)c6orf138, dj402h5.2, flj41841
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
30.99
  • 30.99
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.50e4
  • 1.50e4
27.01
  • 27.01
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
25.34
  • 25.34
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000009411.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSOCUG00000009411.

Cross-references

EnsemblENSOCUG00000009411 (PTCHD4)
HGNCHGNC:21345 (PTCHD4)
EMBLAAGW02018122, AAGW02018123
Uniprot/SPTREMBLG1TYQ3, G1TYQ3_RABIT

Do not show this banner again