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O. cuniculus Gene: BCO2 - ENSOCUG00000009662 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000009662
NameBCO2
Descriptionbeta-carotene oxygenase 2 [Source:HGNC Symbol;Acc:HGNC:18503]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)b-diox-ii, bcdo2, flj34464
Orthologs(s)19 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
572
  • 572
  • 982
97.22
  • 97.22
  • 95.23
AEIR
  • AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
1.76e3
  • 1.76e3
91.42
  • 91.42
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.78e3
  • 1.78e3
91.34
  • 91.34
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.54e3
  • 2.54e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.58e3
  • 4.58e3
  • 7.30e3
  • 9.70e3
77.72
  • 77.72
  • 64.48
  • 52.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
5.86e3
  • 5.86e3
71.46
  • 71.46
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.61e3
  • 6.61e3
  • 9.08e3
67.83
  • 67.83
  • 55.80
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.26e3
  • 7.26e3
  • 8.21e3
64.65
  • 64.65
  • 60.06
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.82e3
  • 8.82e3
57.08
  • 57.08
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
8.90e3
  • 8.90e3
56.66
  • 56.66
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.08e3
  • 9.08e3
55.83
  • 55.83
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
9.10e3
  • 9.10e3
55.72
  • 55.72
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
9.13e3
  • 9.13e3
55.57
  • 55.57
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.04e4
  • 1.04e4
49.56
  • 49.56
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
48.37
  • 48.37
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
45.95
  • 45.95
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
43.93
  • 43.93
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.32e4
  • 1.32e4
35.71
  • 35.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euarchontoglires4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species15 genesCompare expression
Euteleostomi15 species17 genesCompare expression
Bilateria16 species19 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000009662.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSOCUG00000009662.

Cross-references

EnsemblENSOCUG00000009662 (BCO2)
HGNCHGNC:18503 (BCO2)
EMBLAAGW02009349, AAGW02009350
Uniprot/SPTREMBLG1SXN4, G1SXN4_RABIT

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