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O. cuniculus Gene: COX6A1 - ENSOCUG00000009873 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000009873
NameCOX6A1
Descriptioncytochrome c oxidase subunit 6A1, mitochondrial precursor [Source:RefSeq peptide;Acc:NP_001164354]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)cox6a
Orthologs(s)22 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
61.0
  • 61.0
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
83.0
  • 83.0
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
84.6
  • 84.6
99.59
  • 99.59
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
114
  • 114
99.45
  • 99.45
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
130
  • 130
99.37
  • 99.37
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
167
  • 167
99.19
  • 99.19
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
180
  • 180
99.13
  • 99.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
209
  • 209
  • 398
98.99
  • 98.99
  • 98.07
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
216
  • 216
  • 328
98.96
  • 98.96
  • 98.41
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
227
  • 227
98.90
  • 98.90
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
249
  • 249
98.79
  • 98.79
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
260
  • 260
98.74
  • 98.74
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
265
  • 265
98.72
  • 98.72
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
284
  • 284
98.62
  • 98.62
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
335
  • 335
98.37
  • 98.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
342
  • 342
  • 495
  • 590
98.34
  • 98.34
  • 97.60
  • 97.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
422
  • 422
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
463
  • 463
  • 667
97.75
  • 97.75
  • 96.76
AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
655
  • 655
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.45e3
  • 1.45e3
92.95
  • 92.95
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.45e3
  • 1.45e3
92.93
  • 92.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species10 genesCompare expression
Boreoeutheria12 species17 genesCompare expression
Theria13 species18 genesCompare expression
Amniota15 species20 genesCompare expression
Tetrapoda16 species22 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000009873.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Sarcopterygii2 genesCompare expression

Paralogy information comes from OMA : ENSOCUG00000009873.

Cross-references

EnsemblENSOCUG00000009873 (COX6A1)
EMBLAAGW02063837
Uniprot/SPTREMBLG1SY28, G1SY28_RABIT

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