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O. cuniculus Gene: RPGRIP1 - ENSOCUG00000010784 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000010784
NameRPGRIP1
Descriptionretinitis pigmentosa GTPase regulator interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13436]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)cord13, lca6, rgi1, rpgrip
Orthologs(s)13 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
680
  • 680
  • 882
96.70
  • 96.70
  • 95.71
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
45.05
  • 45.05
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
33.63
  • 33.63
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
33.19
  • 33.19
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
33.19
  • 33.19
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
  • 1.55e4
30.67
  • 30.67
  • 24.47
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
29.71
  • 29.71
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
28.42
  • 28.42
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
24.49
  • 24.49
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
22.94
  • 22.94
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.68e4
  • 1.68e4
18.42
  • 18.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000010784.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSOCUG00000010784.

Cross-references

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