O. cuniculus Gene: AP1S3 - ENSOCUG00000010806 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000010806
NameAP1S3
Descriptionadaptor related protein complex 1 sigma 3 subunit [Source:HGNC Symbol;Acc:HGNC:18971]
OrganismOryctolagus cuniculus (rabbit)
Orthologs(s)18 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.40e3
  • 3.40e3
83.47
  • 83.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.79e3
  • 5.79e3
  • 6.45e3
71.83
  • 71.83
  • 68.60
AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
6.59e3
  • 6.59e3
67.92
  • 67.92
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
6.92e3
  • 6.92e3
66.32
  • 66.32
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.00e3
  • 9.00e3
56.21
  • 56.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
9.52e3
  • 9.52e3
  • 1.14e4
  • 1.14e4
53.67
  • 53.67
  • 44.60
  • 44.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
50.76
  • 50.76
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.12e4
50.41
  • 50.41
  • 45.41
AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
50.37
  • 50.37
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
48.85
  • 48.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
  • 1.49e4
44.09
  • 44.09
  • 27.37
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
43.21
  • 43.21
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.18e4
  • 1.18e4
42.49
  • 42.49
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
41.87
  • 41.87
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
36.78
  • 36.78
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
30.20
  • 30.20
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
30.20
  • 30.20
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
18.88
  • 18.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000010806.

Paralogs (same species)

Paralogy information comes from OMA : ENSOCUG00000010806.

Cross-references

EnsemblENSOCUG00000010806 (AP1S3)
HGNCHGNC:18971 (AP1S3)
EMBLAAGW02042858
Uniprot/SPTREMBLG1T001, G1T001_RABIT

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