O. cuniculus Gene: COCH - ENSOCUG00000012042 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000012042
NameCOCH
Descriptioncochlin [Source:HGNC Symbol;Acc:HGNC:2180]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)coch-5b2, dfna31, dfna9
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.08e3
  • 1.08e3
  • 1.17e3
  • 3.01e3
94.77
  • 94.77
  • 94.33
  • 85.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.47e3
  • 1.47e3
92.87
  • 92.87
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.66e3
  • 1.66e3
91.93
  • 91.93
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
2.30e3
  • 2.30e3
88.82
  • 88.82
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.07e3
  • 3.07e3
85.05
  • 85.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
46.49
  • 46.49
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.22e4
  • 1.22e4
40.51
  • 40.51
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
37.49
  • 37.49
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
36.15
  • 36.15
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
34.64
  • 34.64
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
31.33
  • 31.33
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
28.52
  • 28.52
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
27.23
  • 27.23
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.50e4
  • 1.50e4
26.76
  • 26.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.53e4
25.97
  • 25.97
  • 25.75
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000012042.

Cross-references

EnsemblENSOCUG00000012042 (COCH)
HGNCHGNC:2180 (COCH)
EMBLAAGW02023942
Uniprot/SPTREMBLG1T2H9, G1T2H9_RABIT

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