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O. cuniculus Gene: PALMD - ENSOCUG00000012258 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000012258
NamePALMD
Descriptionpalmdelphin [Source:HGNC Symbol;Acc:HGNC:15846]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)c1orf11, flj20271, palml
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.59e3
  • 1.59e3
  • 2.41e3
  • 2.96e3
92.25
  • 92.25
  • 88.27
  • 85.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.71e3
  • 1.71e3
91.71
  • 91.71
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.13e3
  • 2.13e3
  • 2.91e3
89.65
  • 89.65
  • 85.84
AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
2.59e3
  • 2.59e3
87.42
  • 87.42
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.31e3
  • 3.31e3
83.87
  • 83.87
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
3.32e3
  • 3.32e3
83.84
  • 83.84
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.34e3
  • 5.34e3
  • 6.19e3
74.02
  • 74.02
  • 69.88
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.13e3
  • 8.13e3
60.45
  • 60.45
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
9.12e3
  • 9.12e3
55.59
  • 55.59
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
9.99e3
  • 9.99e3
51.38
  • 51.38
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
50.63
  • 50.63
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
49.03
  • 49.03
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
1.06e4
  • 1.06e4
48.23
  • 48.23
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
42.84
  • 42.84
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
41.90
  • 41.90
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
41.64
  • 41.64
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
38.65
  • 38.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000012258.

Cross-references

EnsemblENSOCUG00000012258 (PALMD)
HGNCHGNC:15846 (PALMD)
EMBLAAGW02001272
Uniprot/SPTREMBLG1T2X6, G1T2X6_RABIT

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