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O. cuniculus Gene: TOPBP1 - ENSOCUG00000012755 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000012755
NameTOPBP1
Descriptiontopoisomerase (DNA) II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)kiaa0259, top2bp1
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.14e3
  • 3.14e3
  • 3.45e3
84.71
  • 84.71
  • 83.20
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
4.31e3
  • 4.31e3
79.02
  • 79.02
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.89e3
  • 4.89e3
  • 5.17e3
  • 6.29e3
76.19
  • 76.19
  • 74.84
  • 69.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.91e3
  • 4.91e3
76.11
  • 76.11
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.91e3
  • 4.91e3
76.10
  • 76.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.19e3
  • 5.19e3
  • 6.25e3
74.72
  • 74.72
  • 69.57
AEIR
  • AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
5.22e3
  • 5.22e3
74.62
  • 74.62
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
5.59e3
  • 5.59e3
72.79
  • 72.79
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
5.69e3
  • 5.69e3
72.33
  • 72.33
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
5.77e3
  • 5.77e3
71.90
  • 71.90
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
5.85e3
  • 5.85e3
71.54
  • 71.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.87e3
  • 5.87e3
  • 7.06e3
71.41
  • 71.41
  • 65.65
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
6.48e3
  • 6.48e3
68.47
  • 68.47
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.45e3
  • 7.45e3
63.72
  • 63.72
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.50e3
  • 7.50e3
63.51
  • 63.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.64e3
  • 7.64e3
62.84
  • 62.84
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.57e3
  • 8.57e3
58.31
  • 58.31
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000012755.

Cross-references

EnsemblENSOCUG00000012755 (TOPBP1)
HGNCHGNC:17008 (TOPBP1)
Uniprot/SPTREMBLG1T411, G1T411_RABIT

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