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O. cuniculus Gene: PCMTD2 - ENSOCUG00000012879 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000012879
NamePCMTD2
Descriptionprotein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)c20orf36, flj10883
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.26e3
  • 5.26e3
74.41
  • 74.41
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.26e3
  • 5.26e3
74.41
  • 74.41
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
5.74e3
  • 5.74e3
72.07
  • 72.07
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
5.96e3
  • 5.96e3
71.02
  • 71.02
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.43e3
  • 6.43e3
68.69
  • 68.69
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
6.52e3
  • 6.52e3
68.26
  • 68.26
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.56e3
  • 6.56e3
  • 7.45e3
68.10
  • 68.10
  • 63.76
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.23e3
  • 7.23e3
  • 7.30e3
64.82
  • 64.82
  • 64.50
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.61e3
  • 8.61e3
58.12
  • 58.12
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
8.72e3
  • 8.72e3
57.58
  • 57.58
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
9.34e3
  • 9.34e3
54.55
  • 54.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.36e3
  • 9.36e3
  • 1.02e4
54.43
  • 54.43
  • 50.31
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
9.54e3
  • 9.54e3
53.57
  • 53.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.64e3
  • 9.64e3
  • 1.01e4
  • 1.06e4
53.07
  • 53.07
  • 51.08
  • 48.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
51.60
  • 51.60
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.01e4
  • 1.01e4
50.93
  • 50.93
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.03e4
  • 1.03e4
49.74
  • 49.74
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
33.94
  • 33.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species4 genesCompare expression
Euarchontoglires7 species8 genesCompare expression
Boreoeutheria12 species13 genesCompare expression
Mammalia13 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species19 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000012879.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSOCUG00000012879.

Cross-references

EnsemblENSOCUG00000012879 (PCMTD2)
HGNCHGNC:15882 (PCMTD2)
Uniprot/SPTREMBLG1T492, G1T492_RABIT

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