We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

O. cuniculus Gene: SEC22C - ENSOCUG00000013119 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000013119
NameSEC22C
DescriptionSEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)mgc13261, mgc5373, sec22l3
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.11e3
  • 5.11e3
  • 8.22e3
75.15
  • 75.15
  • 60.02
AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
8.30e3
  • 8.30e3
59.62
  • 59.62
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
8.45e3
  • 8.45e3
58.88
  • 58.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
8.59e3
  • 8.59e3
  • 9.13e3
  • 9.31e3
58.21
  • 58.21
  • 55.56
  • 54.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.61e3
  • 8.61e3
58.09
  • 58.09
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
8.72e3
  • 8.72e3
57.54
  • 57.54
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.18e3
  • 9.18e3
55.33
  • 55.33
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
9.22e3
  • 9.22e3
55.12
  • 55.12
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
9.23e3
  • 9.23e3
55.07
  • 55.07
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.41e3
  • 9.41e3
54.19
  • 54.19
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
9.43e3
  • 9.43e3
54.11
  • 54.11
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.48e3
  • 9.48e3
  • 1.07e4
53.87
  • 53.87
  • 47.76
AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
9.62e3
  • 9.62e3
53.18
  • 53.18
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
9.87e3
  • 9.87e3
51.96
  • 51.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.87e3
  • 9.87e3
  • 1.02e4
51.95
  • 51.95
  • 50.21
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
49.75
  • 49.75
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
44.40
  • 44.40
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
38.33
  • 38.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000013119.

Cross-references

EnsemblENSOCUG00000013119 (SEC22C)
HGNCHGNC:16828 (SEC22C)
EMBLAAGW02056080
Uniprot/SPTREMBLG1T4R7, G1T4R7_RABIT

Do not show this banner again