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O. cuniculus Gene: SORBS1 - ENSOCUG00000013647 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000013647
NameSORBS1
Descriptionsorbin and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14565]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)cap, flj12406, kiaa1296, ponsin, sh3d5, sh3p12
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
768
  • 768
96.27
  • 96.27
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.49e3
  • 1.49e3
  • 2.65e3
92.74
  • 92.74
  • 87.12
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.09e3
  • 4.09e3
  • 4.39e3
  • 8.27e3
80.12
  • 80.12
  • 78.62
  • 59.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.73e3
  • 4.73e3
76.97
  • 76.97
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.74e3
  • 4.74e3
76.94
  • 76.94
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.91e3
  • 4.91e3
76.11
  • 76.11
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.94e3
  • 4.94e3
  • 6.13e3
75.94
  • 75.94
  • 70.16
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
5.09e3
  • 5.09e3
75.21
  • 75.21
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
6.35e3
  • 6.35e3
69.09
  • 69.09
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.89e3
  • 6.89e3
66.45
  • 66.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.25e3
  • 7.25e3
  • 8.44e3
64.74
  • 64.74
  • 58.91
AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
7.31e3
  • 7.31e3
64.43
  • 64.43
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
7.83e3
  • 7.83e3
61.89
  • 61.89
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.87e3
  • 7.87e3
61.71
  • 61.71
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.85e3
  • 8.85e3
56.93
  • 56.93
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.96e3
  • 8.96e3
56.42
  • 56.42
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
9.27e3
  • 9.27e3
54.90
  • 54.90
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.03e4
  • 1.03e4
49.95
  • 49.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000013647.

Cross-references

EnsemblENSOCUG00000013647 (SORBS1)
HGNCHGNC:14565 (SORBS1)
EMBLAAGW02036194, AAGW02036195, AAGW02036196
Uniprot/SPTREMBLG1T5V5, G1T5V5_RABIT

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