We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

O. cuniculus Gene: VPS26B - ENSOCUG00000013699 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000013699
NameVPS26B
DescriptionVPS26 retromer complex component B [Source:HGNC Symbol;Acc:HGNC:28119]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)mgc10485, pep8b
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
2.01e3
  • 2.01e3
90.21
  • 90.21
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.22e3
  • 3.22e3
84.31
  • 84.31
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.85e3
  • 3.85e3
81.27
  • 81.27
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
3.97e3
  • 3.97e3
80.68
  • 80.68
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
4.01e3
  • 4.01e3
80.49
  • 80.49
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.11e3
  • 4.11e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.12e3
  • 4.12e3
79.95
  • 79.95
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.91e3
  • 4.91e3
  • 5.25e3
76.10
  • 76.10
  • 74.43
AEIR
  • AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
4.99e3
  • 4.99e3
75.73
  • 75.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.31e3
  • 5.31e3
  • 5.87e3
  • 6.28e3
74.18
  • 74.18
  • 71.43
  • 69.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
5.42e3
  • 5.42e3
73.62
  • 73.62
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.47e3
  • 5.47e3
  • 7.35e3
73.41
  • 73.41
  • 64.23
AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
5.79e3
  • 5.79e3
71.81
  • 71.81
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
5.88e3
  • 5.88e3
71.41
  • 71.41
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.02e3
  • 6.02e3
  • 6.46e3
70.72
  • 70.72
  • 68.59
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.35e3
  • 6.35e3
69.10
  • 69.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.69e3
  • 6.69e3
67.43
  • 67.43
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.39e3
  • 8.39e3
59.15
  • 59.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000013699.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression

Paralogy information comes from OMA : ENSOCUG00000013699.

Cross-references

EnsemblENSOCUG00000013699 (VPS26B)
HGNCHGNC:28119 (VPS26B)
Uniprot/SPTREMBLG1T5Y3, G1T5Y3_RABIT

Do not show this banner again