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O. cuniculus Gene: LSAMP - ENSOCUG00000014052 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000014052
NameLSAMP
Descriptionlimbic system-associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)iglon3, lamp
Orthologs(s)22 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
863
  • 863
95.80
  • 95.80
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.60e3
  • 1.60e3
92.20
  • 92.20
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.33e3
  • 3.33e3
83.78
  • 83.78
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.54e3
  • 4.54e3
  • 6.55e3
  • 8.20e3
77.91
  • 77.91
  • 68.10
  • 60.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
4.99e3
  • 4.99e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
5.55e3
  • 5.55e3
72.99
  • 72.99
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.25e3
  • 7.25e3
64.70
  • 64.70
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
8.36e3
  • 8.36e3
59.31
  • 59.31
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
8.51e3
  • 8.51e3
58.60
  • 58.60
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.51e3
  • 9.51e3
  • 9.70e3
53.73
  • 53.73
  • 52.79
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
9.57e3
  • 9.57e3
53.44
  • 53.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.11e4
48.54
  • 48.54
  • 45.75
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
46.77
  • 46.77
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
43.04
  • 43.04
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
43.03
  • 43.03
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
42.70
  • 42.70
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
36.62
  • 36.62
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
36.54
  • 36.54
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
33.15
  • 33.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000014052.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression

Paralogy information comes from OMA : ENSOCUG00000014052.

Cross-references

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