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O. cuniculus Gene: SLC10A6 - ENSOCUG00000014905 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000014905
NameSLC10A6
Descriptionsolute carrier family 10 (sodium/bile acid cotransporter), member 6 [Source:HGNC Symbol;Acc:HGNC:30603]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)soat
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.34e3
  • 5.34e3
  • 6.88e3
74.03
  • 74.03
  • 66.51
AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
8.69e3
  • 8.69e3
57.71
  • 57.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.48e3
  • 9.48e3
  • 1.02e4
  • 1.10e4
53.88
  • 53.88
  • 50.18
  • 46.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.77e3
  • 9.77e3
52.47
  • 52.47
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.02e4
  • 1.02e4
50.46
  • 50.46
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.22e4
41.54
  • 41.54
  • 40.85
AEIR
  • AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
41.47
  • 41.47
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
39.75
  • 39.75
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
38.30
  • 38.30
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
37.34
  • 37.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
  • 1.33e4
36.67
  • 36.67
  • 35.43
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
34.15
  • 34.15
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
33.76
  • 33.76
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
31.77
  • 31.77
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
31.76
  • 31.76
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
26.08
  • 26.08
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.53e4
  • 1.53e4
25.65
  • 25.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000014905.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSOCUG00000014905.

Cross-references

EnsemblENSOCUG00000014905 (SLC10A6)
HGNCHGNC:30603 (SLC10A6)
EMBLAAGW02022731
Uniprot/SPTREMBLG1T8C3, G1T8C3_RABIT

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