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O. cuniculus Gene: SEPHS1 - ENSOCUG00000015261 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000015261
NameSEPHS1
Descriptionselenophosphate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:19685]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)sps, sps1
Orthologs(s)24 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
937
  • 937
95.44
  • 95.44
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.00e3
  • 1.00e3
95.13
  • 95.13
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
1.21e3
  • 1.21e3
94.11
  • 94.11
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.30e3
  • 1.30e3
93.69
  • 93.69
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.53e3
  • 1.53e3
92.54
  • 92.54
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.57e3
  • 1.57e3
  • 2.24e3
92.38
  • 92.38
  • 89.10
AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.63e3
  • 1.63e3
92.08
  • 92.08
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.77e3
  • 1.77e3
91.41
  • 91.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.81e3
  • 1.81e3
  • 1.83e3
  • 2.74e3
91.21
  • 91.21
  • 91.09
  • 86.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.97e3
  • 1.97e3
90.43
  • 90.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.12e3
  • 2.12e3
  • 2.60e3
89.69
  • 89.69
  • 87.35
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.56e3
  • 2.56e3
87.54
  • 87.54
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.63e3
  • 2.63e3
87.19
  • 87.19
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
2.63e3
  • 2.63e3
87.18
  • 87.18
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.91e3
  • 2.91e3
85.84
  • 85.84
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.40e3
  • 4.40e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.42e3
  • 5.42e3
  • 6.15e3
73.61
  • 73.61
  • 70.07
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000015261.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSOCUG00000015261.

Cross-references

EnsemblENSOCUG00000015261 (SEPHS1)
HGNCHGNC:19685 (SEPHS1)
EMBLAAGW02026690
Uniprot/SPTREMBLG1T920, G1T920_RABIT, G1U4M1, G1U4M1_RABIT

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