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O. cuniculus Gene: TRIM9 - ENSOCUG00000015541 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000015541
NameTRIM9
Descriptiontripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)rnf91, spring
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.91e3
  • 1.91e3
90.71
  • 90.71
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.88e3
  • 2.88e3
85.97
  • 85.97
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
46.32
  • 46.32
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 1.51e4
44.01
  • 44.01
  • 26.32
AEIR
  • AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.26e4
  • 1.26e4
38.78
  • 38.78
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.29e4
  • 1.29e4
37.27
  • 37.27
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.31e4
  • 1.31e4
36.21
  • 36.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.51e4
  • 1.72e4
34.30
  • 34.30
  • 26.45
  • 16.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
32.43
  • 32.43
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria18 species18 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000015541.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSOCUG00000015541.

Cross-references

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