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O. cuniculus Gene: CDH7 - ENSOCUG00000015600 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000015600
NameCDH7
Descriptioncadherin 7, type 2 [Source:HGNC Symbol;Acc:HGNC:1766]
OrganismOryctolagus cuniculus (rabbit)
Orthologs(s)18 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.74e3
  • 8.74e3
57.44
  • 57.44
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
48.06
  • 48.06
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
34.97
  • 34.97
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
1.38e4
  • 1.38e4
32.92
  • 32.92
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.71e4
29.28
  • 29.28
  • 16.75
AEIR
  • AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
28.92
  • 28.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
27.21
  • 27.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000015600.

Paralogs (same species)

Cross-references

EnsemblENSOCUG00000015600 (CDH7)
HGNCHGNC:1766 (CDH7)
EMBLAAGW02050719
Uniprot/SPTREMBLG1T9T1, G1T9T1_RABIT

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