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O. cuniculus Gene: SLC17A8 - ENSOCUG00000015995 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000015995
NameSLC17A8
Descriptionsolute carrier family 17 (vesicular glutamate transporter), member 8 [Source:HGNC Symbol;Acc:HGNC:20151]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)dfna25, vglut3
Orthologs(s)25 orthologs
Paralog(s)31 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.93e3
  • 8.93e3
  • 8.99e3
56.54
  • 56.54
  • 56.24
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
47.01
  • 47.01
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
40.14
  • 40.14
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
38.93
  • 38.93
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
33.74
  • 33.74
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
29.57
  • 29.57
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
26.01
  • 26.01
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.57e4
  • 1.57e4
23.82
  • 23.82
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
22.55
  • 22.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000015995.

Paralogs (same species)

Cross-references

EnsemblENSOCUG00000015995 (SLC17A8)
HGNCHGNC:20151 (SLC17A8)
EMBLAAGW02034148
Uniprot/SPTREMBLG1TAP0, G1TAP0_RABIT

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