We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

O. cuniculus Gene: DEPDC1B - ENSOCUG00000016650 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000016650
NameDEPDC1B
DescriptionDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)brcc3, xtp1
Orthologs(s)20 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.85e3
  • 5.85e3
  • 9.65e3
71.52
  • 71.52
  • 53.04
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
7.40e3
  • 7.40e3
63.99
  • 63.99
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.01e4
  • 1.01e4
51.00
  • 51.00
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.04e4
  • 1.04e4
49.46
  • 49.46
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.33e4
  • 1.51e4
46.25
  • 46.25
  • 35.36
  • 26.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
38.52
  • 38.52
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.29e4
  • 1.29e4
37.05
  • 37.05
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
36.93
  • 36.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
  • 1.58e4
36.14
  • 36.14
  • 23.25
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
35.89
  • 35.89
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
  • 1.43e4
30.63
  • 30.63
  • 30.62
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
28.81
  • 28.81
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
27.84
  • 27.84
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
24.19
  • 24.19
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
23.07
  • 23.07
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
19.82
  • 19.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000016650.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSOCUG00000016650.

Cross-references

Do not show this banner again