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O. cuniculus Gene: TMEM198 - ENSOCUG00000021721 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000021721
NameTMEM198
Descriptiontransmembrane protein 198 [Source:HGNC Symbol;Acc:HGNC:33704]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)mgc99813, tmem198a
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
4.65e3
  • 4.65e3
77.38
  • 77.38
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.80e3
  • 5.80e3
71.76
  • 71.76
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
6.21e3
  • 6.21e3
69.79
  • 69.79
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.59e3
  • 7.59e3
63.08
  • 63.08
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.14e4
45.37
  • 45.37
  • 44.64
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
42.04
  • 42.04
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
  • 1.32e4
39.10
  • 39.10
  • 35.94
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
39.03
  • 39.03
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
37.37
  • 37.37
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.29e4
  • 1.29e4
37.03
  • 37.03
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.30e4
  • 1.30e4
36.52
  • 36.52
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
35.87
  • 35.87
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
35.83
  • 35.83
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
35.81
  • 35.81
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
1.35e4
  • 1.35e4
34.49
  • 34.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
31.00
  • 31.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
  • 1.44e4
  • 1.46e4
30.82
  • 30.82
  • 29.79
  • 29.04
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000021721.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSOCUG00000021721.

Cross-references

EnsemblENSOCUG00000021721 (TMEM198)
HGNCHGNC:33704 (TMEM198)
EMBLAAGW02042758, AAGW02042759
Uniprot/SPTREMBLG1TEW8, G1TEW8_RABIT

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