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O. cuniculus Gene: NUP43 - ENSOCUG00000024586 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000024586
NameNUP43
Descriptionnucleoporin 43kDa [Source:HGNC Symbol;Acc:HGNC:21182]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)ba350j20.1, flj13287
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.73e3
  • 1.73e3
  • 2.25e3
91.57
  • 91.57
  • 89.06
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.33e3
  • 5.33e3
  • 7.31e3
74.08
  • 74.08
  • 64.43
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.58e3
  • 5.58e3
72.86
  • 72.86
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.37e3
  • 7.37e3
64.13
  • 64.13
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
7.38e3
  • 7.38e3
64.08
  • 64.08
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
7.51e3
  • 7.51e3
63.46
  • 63.46
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
7.71e3
  • 7.71e3
62.47
  • 62.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.77e3
  • 7.77e3
  • 9.14e3
62.18
  • 62.18
  • 55.51
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
8.24e3
  • 8.24e3
  • 8.70e3
  • 9.80e3
59.92
  • 59.92
  • 57.68
  • 52.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.91e3
  • 8.91e3
56.64
  • 56.64
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
8.91e3
  • 8.91e3
56.64
  • 56.64
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
8.93e3
  • 8.93e3
56.55
  • 56.55
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
9.22e3
  • 9.22e3
55.13
  • 55.13
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
9.23e3
  • 9.23e3
55.10
  • 55.10
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.26e3
  • 9.26e3
54.95
  • 54.95
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
9.69e3
  • 9.69e3
52.84
  • 52.84
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.93e3
  • 9.93e3
51.67
  • 51.67
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
48.42
  • 48.42
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
1.06e4
  • 1.06e4
48.34
  • 48.34
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000024586.

Cross-references

EnsemblENSOCUG00000024586 (NUP43)
HGNCHGNC:21182 (NUP43)
Uniprot/SPTREMBLG1TS68, G1TS68_RABIT

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