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O. cuniculus Gene: SLC6A1 - ENSOCUG00000025657 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000025657
NameSLC6A1
DescriptionTransporter [Source:UniProtKB/TrEMBL;Acc:G1TZB6]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)gabathg, gabatr, gat1
Orthologs(s)15 orthologs
Paralog(s)17 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
93.08
  • 93.08
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.75e3
  • 1.75e3
91.51
  • 91.51
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
7.68e3
  • 7.68e3
62.64
  • 62.64
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
7.93e3
  • 7.93e3
61.40
  • 61.40
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
45.96
  • 45.96
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
40.61
  • 40.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.45e4
38.54
  • 38.54
  • 29.66
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
36.51
  • 36.51
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
28.95
  • 28.95
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
28.65
  • 28.65
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
28.63
  • 28.63
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
1.47e4
  • 1.47e4
28.39
  • 28.39
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
  • 1.51e4
  • 1.52e4
27.97
  • 27.97
  • 26.63
  • 25.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
  • 1.68e4
26.38
  • 26.38
  • 18.15
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
18.60
  • 18.60
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
13.94
  • 13.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000025657.

Paralogs (same species)

Cross-references

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