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O. cuniculus Gene: HACD4 - ENSOCUG00000029669 - Oryctolagus cuniculus (rabbit)

General information

Ensembl IDENSOCUG00000029669
NameHACD4
Description3-hydroxyacyl-CoA dehydratase 4 [Source:HGNC Symbol;Acc:HGNC:20920]
OrganismOryctolagus cuniculus (rabbit)
Synonym(s)em:al662879.1, otthumg00000021016, ptplad2
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000104life cycle
811
  • 811
96.06
  • 96.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.44e3
  • 2.44e3
  • 3.66e3
88.12
  • 88.12
  • 82.20
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0018241prime adult stage
3.24e3
  • 3.24e3
84.21
  • 84.21
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.39e3
  • 5.39e3
73.76
  • 73.76
AEIR
  • AEIR
UBERON:0002168left lung
  • UBERON:0000068embryo stage
5.89e3
  • 5.89e3
71.34
  • 71.34
AEIR
  • AEIR
UBERON:0008952upper lobe of left lung
  • UBERON:0000068embryo stage
6.69e3
  • 6.69e3
67.45
  • 67.45
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.82e3
  • 6.82e3
66.81
  • 66.81
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
7.58e3
  • 7.58e3
  • 8.30e3
  • 1.06e4
63.09
  • 63.09
  • 59.61
  • 48.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.81e3
  • 7.81e3
62.02
  • 62.02
AEIR
  • AEIR
UBERON:0015790autopod skin
  • UBERON:0000112sexually immature stage
9.45e3
  • 9.45e3
53.99
  • 53.99
AEIR
  • AEIR
UBERON:0001068skin of back
  • UBERON:0000112sexually immature stage
9.55e3
  • 9.55e3
53.53
  • 53.53
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
  • 1.03e4
50.21
  • 50.21
  • 50.04
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.09e4
  • 1.09e4
47.10
  • 47.10
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
47.06
  • 47.06
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
46.50
  • 46.50
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
46.50
  • 46.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
41.29
  • 41.29
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
39.68
  • 39.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
25.52
  • 25.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSOCUG00000029669.

Cross-references

EnsemblENSOCUG00000029669 (HACD4)
HGNCHGNC:20920 (HACD4)
EMBLAAGW02033053, AAGW02033054
Uniprot/SPTREMBLU3KNG2, U3KNG2_RABIT

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