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P. troglodytes Gene: PHF13 - ENSPTRG00000000092 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000000092
NamePHF13
DescriptionPHD finger protein 13 [Source:HGNC Symbol;Acc:HGNC:22983]
OrganismPan troglodytes (chimpanzee)
Synonym(s)mgc43399
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
3.20e3
  • 3.20e3
  • 4.44e3
87.13
  • 87.13
  • 82.14
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
6.69e3
  • 6.69e3
73.09
  • 73.09
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.93e3
  • 6.93e3
  • 7.85e3
  • 8.20e3
  • 8.25e3
  • 8.66e3
  • 9.16e3
72.11
  • 72.11
  • 68.40
  • 67.01
  • 66.78
  • 65.15
  • 63.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.96e3
  • 6.96e3
  • 9.00e3
  • 1.03e4
  • 1.03e4
71.97
  • 71.97
  • 63.77
  • 58.47
  • 58.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.29e3
  • 7.29e3
  • 7.74e3
  • 8.29e3
  • 8.30e3
  • 8.98e3
70.64
  • 70.64
  • 68.83
  • 66.63
  • 66.58
  • 63.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
8.06e3
  • 8.06e3
67.55
  • 67.55
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
8.10e3
  • 8.10e3
67.39
  • 67.39
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
8.33e3
  • 8.33e3
66.46
  • 66.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
8.59e3
  • 8.59e3
  • 9.85e3
  • 9.89e3
  • 1.05e4
65.44
  • 65.44
  • 60.35
  • 60.19
  • 57.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
8.98e3
  • 8.98e3
63.84
  • 63.84
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
9.32e3
  • 9.32e3
62.47
  • 62.47
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.53e3
  • 9.53e3
  • 1.01e4
  • 1.05e4
61.65
  • 61.65
  • 59.51
  • 57.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
9.57e3
  • 9.57e3
61.49
  • 61.49
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
9.75e3
  • 9.75e3
60.77
  • 60.77
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
9.80e3
  • 9.80e3
60.56
  • 60.56
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.81e3
  • 9.81e3
  • 1.12e4
60.53
  • 60.53
  • 55.01
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.90e3
  • 9.90e3
  • 1.00e4
  • 1.01e4
60.15
  • 60.15
  • 59.69
  • 59.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
55.28
  • 55.28
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
54.68
  • 54.68
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
54.34
  • 54.34
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
54.10
  • 54.10
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
53.11
  • 53.11
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
50.91
  • 50.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000000092.

Cross-references

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