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P. troglodytes Gene: SSBP3 - ENSPTRG00000000770 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000000770
NameSSBP3
Descriptionsingle stranded DNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:15674]
OrganismPan troglodytes (chimpanzee)
Synonym(s)csdp, flj10355, ssdp, ssdp1
Orthologs(s)11 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
871
  • 871
96.50
  • 96.50
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.29e3
  • 1.29e3
94.80
  • 94.80
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.31e3
  • 1.31e3
  • 1.89e3
  • 2.09e3
  • 2.54e3
  • 3.67e3
94.71
  • 94.71
  • 92.39
  • 91.58
  • 89.78
  • 85.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.33e3
  • 1.33e3
94.65
  • 94.65
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.42e3
  • 1.42e3
  • 1.81e3
  • 2.21e3
  • 2.64e3
  • 3.11e3
  • 3.27e3
94.31
  • 94.31
  • 92.72
  • 91.09
  • 89.36
  • 87.48
  • 86.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.48e3
  • 1.48e3
  • 2.08e3
  • 3.28e3
94.06
  • 94.06
  • 91.65
  • 86.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.71e3
  • 1.71e3
  • 2.09e3
  • 2.85e3
93.12
  • 93.12
  • 91.59
  • 88.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
2.19e3
  • 2.19e3
91.18
  • 91.18
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
3.07e3
  • 3.07e3
87.65
  • 87.65
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.36e3
  • 3.36e3
86.50
  • 86.50
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
4.46e3
  • 4.46e3
82.05
  • 82.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
4.79e3
  • 4.79e3
  • 6.21e3
  • 6.96e3
  • 7.40e3
80.72
  • 80.72
  • 74.99
  • 71.98
  • 70.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
4.80e3
  • 4.80e3
80.69
  • 80.69
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
4.83e3
  • 4.83e3
80.54
  • 80.54
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
4.99e3
  • 4.99e3
  • 6.27e3
  • 7.38e3
  • 8.07e3
79.91
  • 79.91
  • 74.78
  • 70.29
  • 67.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
5.13e3
  • 5.13e3
79.35
  • 79.35
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.15e3
  • 5.15e3
  • 7.11e3
79.26
  • 79.26
  • 71.39
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
5.62e3
  • 5.62e3
77.38
  • 77.38
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
5.73e3
  • 5.73e3
  • 6.51e3
76.94
  • 76.94
  • 73.81
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
6.04e3
  • 6.04e3
75.69
  • 75.69
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
7.17e3
  • 7.17e3
71.13
  • 71.13
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
8.04e3
  • 8.04e3
67.63
  • 67.63
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
8.90e3
  • 8.90e3
64.19
  • 64.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae1 species1 geneCompare expression
Catarrhini2 species2 genesCompare expression
Euarchontoglires3 species3 genesCompare expression
Boreoeutheria7 species7 genesCompare expression
Mammalia8 species8 genesCompare expression
Amniota10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000000770.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Mammalia1 geneCompare expression

Paralogy information comes from OMA : ENSPTRG00000000770.

Cross-references

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