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P. troglodytes Gene: PGM1 - ENSPTRG00000000820 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000000820
NamePGM1
Descriptionphosphoglucomutase 1 [Source:HGNC Symbol;Acc:HGNC:8905]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
155
  • 155
99.38
  • 99.38
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
192
  • 192
99.23
  • 99.23
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
400
  • 400
  • 622
  • 1.13e3
  • 1.47e3
98.39
  • 98.39
  • 97.50
  • 95.46
  • 94.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
828
  • 828
  • 1.13e3
  • 1.58e3
  • 1.73e3
96.67
  • 96.67
  • 95.45
  • 93.64
  • 93.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.03e3
  • 2.03e3
  • 2.84e3
  • 4.49e3
91.82
  • 91.82
  • 88.59
  • 81.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.04e3
  • 2.04e3
  • 3.84e3
91.78
  • 91.78
  • 84.53
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.07e3
  • 2.07e3
91.65
  • 91.65
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
2.62e3
  • 2.62e3
89.45
  • 89.45
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
2.89e3
  • 2.89e3
  • 6.57e3
88.38
  • 88.38
  • 73.55
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
3.08e3
  • 3.08e3
  • 3.39e3
  • 3.45e3
  • 3.60e3
  • 4.08e3
87.60
  • 87.60
  • 86.35
  • 86.12
  • 85.52
  • 83.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
3.30e3
  • 3.30e3
  • 3.54e3
  • 3.66e3
  • 4.33e3
  • 4.65e3
  • 4.74e3
86.74
  • 86.74
  • 85.77
  • 85.26
  • 82.58
  • 81.30
  • 80.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.37e3
  • 3.37e3
  • 3.48e3
  • 4.42e3
86.44
  • 86.44
  • 85.98
  • 82.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
3.51e3
  • 3.51e3
85.88
  • 85.88
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
3.78e3
  • 3.78e3
84.77
  • 84.77
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
3.89e3
  • 3.89e3
84.35
  • 84.35
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
4.76e3
  • 4.76e3
80.84
  • 80.84
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
4.91e3
  • 4.91e3
80.24
  • 80.24
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
5.92e3
  • 5.92e3
76.16
  • 76.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
6.63e3
  • 6.63e3
  • 7.98e3
73.30
  • 73.30
  • 67.86
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
7.16e3
  • 7.16e3
71.18
  • 71.18
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
9.84e3
  • 9.84e3
60.41
  • 60.41
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
9.88e3
  • 9.88e3
60.22
  • 60.22
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
56.93
  • 56.93
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
49.78
  • 49.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000000820.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSPTRG00000000820.

Cross-references

EnsemblENSPTRG00000000820 (PGM1)
HGNCHGNC:8905 (PGM1)
EMBLAACZ03001547, AACZ03001548
Uniprot/SPTREMBLH2PZ62, H2PZ62_PANTR

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