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P. troglodytes Gene: STXBP3 - ENSPTRG00000001034 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000001034
NameSTXBP3
Descriptionsyntaxin binding protein 3 [Source:HGNC Symbol;Acc:HGNC:11446]
OrganismPan troglodytes (chimpanzee)
Synonym(s)unc-18c
Orthologs(s)17 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
2.08e3
  • 2.08e3
91.64
  • 91.64
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.55e3
  • 2.55e3
  • 4.23e3
  • 6.10e3
89.75
  • 89.75
  • 82.98
  • 75.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
2.69e3
  • 2.69e3
  • 3.35e3
89.19
  • 89.19
  • 86.51
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
2.75e3
  • 2.75e3
88.95
  • 88.95
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
2.77e3
  • 2.77e3
88.86
  • 88.86
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
2.80e3
  • 2.80e3
88.75
  • 88.75
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.87e3
  • 2.87e3
88.44
  • 88.44
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
3.01e3
  • 3.01e3
87.88
  • 87.88
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
3.07e3
  • 3.07e3
87.65
  • 87.65
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
3.19e3
  • 3.19e3
87.17
  • 87.17
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
3.23e3
  • 3.23e3
86.99
  • 86.99
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.26e3
  • 3.26e3
  • 5.20e3
86.87
  • 86.87
  • 79.08
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
3.38e3
  • 3.38e3
  • 3.75e3
  • 4.29e3
  • 4.57e3
  • 4.68e3
86.41
  • 86.41
  • 84.92
  • 82.75
  • 81.60
  • 81.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.52e3
  • 3.52e3
  • 6.03e3
  • 7.09e3
85.84
  • 85.84
  • 75.74
  • 71.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.63e3
  • 3.63e3
  • 4.32e3
  • 4.77e3
  • 5.81e3
85.40
  • 85.40
  • 82.61
  • 80.81
  • 76.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
3.90e3
  • 3.90e3
  • 3.95e3
  • 4.04e3
  • 4.09e3
  • 4.38e3
  • 6.46e3
84.29
  • 84.29
  • 84.08
  • 83.75
  • 83.55
  • 82.38
  • 74.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
3.94e3
  • 3.94e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.96e3
  • 3.96e3
  • 4.98e3
  • 5.18e3
  • 5.87e3
84.08
  • 84.08
  • 79.94
  • 79.16
  • 76.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
4.13e3
  • 4.13e3
83.38
  • 83.38
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
4.15e3
  • 4.15e3
83.28
  • 83.28
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
4.27e3
  • 4.27e3
82.81
  • 82.81
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
4.57e3
  • 4.57e3
81.62
  • 81.62
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
5.70e3
  • 5.70e3
  • 8.91e3
77.07
  • 77.07
  • 64.12
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
5.92e3
  • 5.92e3
76.16
  • 76.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000001034.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000001034.

Cross-references

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