We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

P. troglodytes Gene: AKNAD1 - ENSPTRG00000001036 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000001036
NameAKNAD1
DescriptionAKNA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28398]
OrganismPan troglodytes (chimpanzee)
Synonym(s)c1orf62, mgc26989
Orthologs(s)11 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
7.82e3
  • 7.82e3
  • 1.02e4
68.51
  • 68.51
  • 59.05
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
48.73
  • 48.73
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
45.64
  • 45.64
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
  • 1.68e4
  • 1.87e4
  • 2.06e4
37.33
  • 37.33
  • 32.18
  • 24.58
  • 17.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 1.83e4
  • 2.07e4
35.79
  • 35.79
  • 26.38
  • 16.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
  • 1.96e4
33.19
  • 33.19
  • 21.21
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000001036.

Cross-references

EnsemblENSPTRG00000001036 (AKNAD1)
HGNCHGNC:28398 (AKNAD1)
EMBLAACZ03005736, AACZ03005737
Uniprot/SPTREMBLH2R0I8, H2R0I8_PANTR

Do not show this banner again