We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

P. troglodytes Gene: PTPN22 - ENSPTRG00000001125 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000001125
NamePTPN22
Descriptionprotein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:HGNC Symbol;Acc:HGNC:9652]
OrganismPan troglodytes (chimpanzee)
Synonym(s)lyp, lyp1, lyp2, ptpn8
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.11e3
  • 2.11e3
91.50
  • 91.50
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
3.50e3
  • 3.50e3
85.90
  • 85.90
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
6.07e3
  • 6.07e3
75.57
  • 75.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
7.52e3
  • 7.52e3
69.73
  • 69.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.16e4
  • 1.16e4
  • 1.22e4
  • 1.29e4
53.11
  • 53.11
  • 50.71
  • 48.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
51.66
  • 51.66
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
49.39
  • 49.39
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
44.24
  • 44.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.44e4
  • 1.55e4
43.04
  • 43.04
  • 41.97
  • 37.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
41.55
  • 41.55
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
  • 1.66e4
41.12
  • 41.12
  • 33.26
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.47e4
  • 1.47e4
  • 1.48e4
40.85
  • 40.85
  • 40.62
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
  • 1.63e4
  • 1.65e4
40.50
  • 40.50
  • 34.36
  • 33.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.53e4
  • 1.53e4
  • 1.59e4
  • 1.60e4
  • 1.62e4
  • 1.65e4
  • 2.01e4
38.46
  • 38.46
  • 36.14
  • 35.64
  • 34.84
  • 33.43
  • 19.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
37.64
  • 37.64
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
37.42
  • 37.42
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
  • 1.70e4
  • 1.77e4
  • 1.84e4
37.28
  • 37.28
  • 31.41
  • 28.59
  • 26.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
  • 1.81e4
32.78
  • 32.78
  • 27.19
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000001125.

Cross-references

EnsemblENSPTRG00000001125 (PTPN22)
HGNCHGNC:9652 (PTPN22)
EMBLAACZ03004420, GABE01010684
Uniprot/SPTREMBLH2PZP7, H2PZP7_PANTR

Do not show this banner again