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P. troglodytes Gene: ADAMTSL4 - ENSPTRG00000001258 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000001258
NameADAMTSL4
DescriptionADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
OrganismPan troglodytes (chimpanzee)
Synonym(s)dkfzp434k1772, tsrc1
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.18e3
  • 2.18e3
  • 3.61e3
  • 5.45e3
  • 6.96e3
91.23
  • 91.23
  • 85.46
  • 78.06
  • 71.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
2.90e3
  • 2.90e3
88.35
  • 88.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
4.56e3
  • 4.56e3
  • 5.43e3
  • 5.52e3
  • 9.41e3
81.63
  • 81.63
  • 78.15
  • 77.80
  • 62.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
6.81e3
  • 6.81e3
72.59
  • 72.59
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
8.27e3
  • 8.27e3
66.70
  • 66.70
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
8.29e3
  • 8.29e3
66.63
  • 66.63
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
8.68e3
  • 8.68e3
65.08
  • 65.08
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
9.52e3
  • 9.52e3
61.67
  • 61.67
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
9.81e3
  • 9.81e3
60.51
  • 60.51
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.26e4
58.70
  • 58.70
  • 49.13
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
50.15
  • 50.15
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.24e4
  • 1.24e4
  • 1.29e4
  • 1.42e4
49.97
  • 49.97
  • 47.94
  • 42.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.33e4
  • 1.54e4
49.46
  • 49.46
  • 46.38
  • 38.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.27e4
  • 1.27e4
  • 1.28e4
  • 1.30e4
  • 1.31e4
  • 1.35e4
48.87
  • 48.87
  • 48.43
  • 47.68
  • 47.32
  • 45.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
1.28e4
  • 1.28e4
  • 1.28e4
  • 1.30e4
  • 1.40e4
  • 1.44e4
  • 1.54e4
48.49
  • 48.49
  • 48.46
  • 47.73
  • 43.48
  • 41.93
  • 38.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
48.19
  • 48.19
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
  • 1.49e4
47.30
  • 47.30
  • 40.16
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
45.86
  • 45.86
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
  • 1.87e4
45.68
  • 45.68
  • 24.61
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
43.65
  • 43.65
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
41.65
  • 41.65
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
41.36
  • 41.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000001258.

Cross-references

EnsemblENSPTRG00000001258 (ADAMTSL4)
HGNCHGNC:19706 (ADAMTSL4)
EMBLAACZ03007812, AACZ03007813
Uniprot/SPTREMBLH2PZX0, H2PZX0_PANTR

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