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P. troglodytes Gene: PTPN7 - ENSPTRG00000001848 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000001848
NamePTPN7
Descriptionprotein tyrosine phosphatase, non-receptor type 7 [Source:HGNC Symbol;Acc:HGNC:9659]
OrganismPan troglodytes (chimpanzee)
Synonym(s)heptp, lc-ptp
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
90.00
  • 90.00
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.58e3
  • 4.58e3
81.56
  • 81.56
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
6.52e3
  • 6.52e3
73.76
  • 73.76
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
7.79e3
  • 7.79e3
68.65
  • 68.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
8.72e3
  • 8.72e3
  • 1.06e4
64.88
  • 64.88
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.15e4
  • 1.18e4
  • 1.49e4
55.11
  • 55.11
  • 53.61
  • 52.40
  • 40.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
47.80
  • 47.80
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
  • 1.73e4
46.88
  • 46.88
  • 30.38
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
1.35e4
  • 1.35e4
  • 1.41e4
  • 1.44e4
45.61
  • 45.61
  • 43.25
  • 42.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.75e4
  • 1.88e4
40.89
  • 40.89
  • 29.57
  • 24.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
40.88
  • 40.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.48e4
40.86
  • 40.86
  • 40.46
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
  • 1.62e4
  • 1.93e4
38.19
  • 38.19
  • 34.90
  • 22.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
  • 2.09e4
34.08
  • 34.08
  • 15.82
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
33.57
  • 33.57
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.83e4
  • 1.83e4
26.42
  • 26.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000001848.

Cross-references

EnsemblENSPTRG00000001848 (PTPN7)
HGNCHGNC:9659 (PTPN7)
EMBLAACZ03002460, AACZ03002461
Uniprot/SPTREMBLH2Q0W8, H2Q0W8_PANTR

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